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Date: Fri, 5 Jun 2009 15:00:49 +1200 (NZST)
From: The Superuser <root@ecs.vuw.ac.nz>
Message-Id: <200906050300.n5530nHv000612@mamba.msor.vuw.ac.nz>
To: sgeadmin@ecs.vuw.ac.nz
Subject: GE 6.2u2_1: Job 368341 failed


Job 368341 caused action: none
 User        = djp
 Queue       = all.q@mamba.msor.vuw.ac.nz
 Start Time  = <unknown>
 End Time    = <unknown>
failed before writing exit_status:shepherd exited with exit status 19: before
writing exit_status
Shepherd trace:
06/04/2009 13:10:16 [96:776]: shepherd called with uid = 0, euid = 96
06/04/2009 13:10:16 [96:776]: csp = 0
06/04/2009 13:10:16 [96:776]: starting up 6.2u2_1
06/04/2009 13:10:16 [96:776]: setpgid(776, 776) returned 0
06/04/2009 13:10:16 [96:776]: no prolog script to start
06/04/2009 13:10:16 [96:776]: forked "job" with pid 818
06/04/2009 13:10:16 [96:776]: child: job - pid: 818
06/04/2009 13:10:16 [96:818]: Child: Starting son(job, /vol/scratch/djp/bin/tutte, 0);

06/04/2009 13:10:16 [96:818]: pid=818 pgrp=818 sid=818 old pgrp=776 getlogin()=root
06/04/2009 13:10:16 [96:818]: reading passwd information for user 'djp'
06/04/2009 13:10:16 [96:818]: setosjobid: uid = 0, euid = 96
06/04/2009 13:10:16 [96:818]: setting limits
06/04/2009 13:10:16 [96:818]: RLIMIT_CPU setting: (soft 0INFINITY hard 0INFINITY)
resulting: (soft 0INFINITY hard 0INFINITY)
06/04/2009 13:10:16 [96:818]: RLIMIT_FSIZE setting: (soft 0INFINITY hard
0INFINITY) resulting: (soft 0INFINITY hard 0INFINITY)
06/04/2009 13:10:16 [96:818]: RLIMIT_DATA setting: (soft 0INFINITY hard 0INFINITY)
resulting: (soft 3221225472 hard 3221225472)
06/04/2009 13:10:16 [96:818]: RLIMIT_STACK setting: (soft 0INFINITY hard
0INFINITY) resulting: (soft 67108864 hard 67108864)
06/04/2009 13:10:16 [96:818]: RLIMIT_CORE setting: (soft 0INFINITY hard 0INFINITY)
resulting: (soft 0INFINITY hard 0INFINITY)
06/04/2009 13:10:16 [96:818]: RLIMIT_RSS setting: (soft 0INFINITY hard 0INFINITY)
resulting: (soft 0INFINITY hard 0INFINITY)
06/04/2009 13:10:16 [96:818]: setting environment
06/04/2009 13:10:16 [96:818]: Initializing error file
06/04/2009 13:10:16 [96:818]: switching to intermediate/target user
06/04/2009 13:10:16 [1104:818]: closing all filedescriptors
06/04/2009 13:10:16 [1104:818]: further messages are in "error" and "trace"
06/04/2009 13:10:16 [1104:818]: using stdout as stderr
06/04/2009 13:10:16 [1104:818]: now running with uid=1104, euid=1104
06/04/2009 13:10:16 [1104:818]: execvp(/bin/csh, "-csh" "-c"
"/vol/scratch/djp/bin/tutte --no-reset --cache-buckets=1M --cache-size=768M
--graphs=31151:31200 edge32.split ")
06/04/2009 13:10:16 [1104:818]: not a GUI job, starting directly
06/05/2009 09:11:46 [96:776]: wait3 returned -1
06/05/2009 09:11:46 [96:776]: forward_signal_to_job(): mapping signal 21 TTIN
06/05/2009 09:11:46 [96:776]: mapped signal TTIN to signal STOP
06/05/2009 09:11:46 [96:776]: queued signal STOP
06/05/2009 09:11:46 [96:776]: kill(-818, STOP)
06/05/2009 09:11:46 [96:776]: now sending signal STOP to pid -818

Shepherd pe_hostfile:
mamba.msor.vuw.ac.nz 1 all.q@mamba.msor.vuw.ac.nz <NULL>